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ChIPtest: Nonparametric Methods for Identifying Differential Enrichment Regions with ChIP-Seq Data

Nonparametric Tests to identify the differential enrichment region for two conditions or time-course ChIP-seq data. It includes: data preprocessing function, estimation of a small constant used in hypothesis testing, a kernel-based two sample nonparametric test, two assumption-free two sample nonparametric test.

ChIPtest.pdf